miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|289112087|gb|GW530979.1|GW530979 TGATTATTTCTTCTTTAGTGCACATAAATGTATATGTTCTTTATCAATTTTACCGGTATTTTGTTTTAAACTTGGAAATG
ATTTTCAAAGTATCCTGCAATTCTACAACAAACAATTTGATGGACTCAGAAAACTATTTTGAAAGTGAGCCGTTTGCACT
GCGAGAGCGAATCCTTCAAGATGGAACTGATATTAGATATCAACTCGTGGATTTATCCTATGGACTTGGGTGATAAATTC
AGGCTAGTGTTAGCCACCACATTACGCGAGGATGGACAACCTGACGCTGGTGATTGGAACCCCATAGAAATGGATCAAAA
CGGCTCTAGGGCCGACAGTTTCGAGTATGTCATGTACGGCAAGATTTATCGGATCGAAGGTGACGACAAGGTGAAGGAGT
CGCACAAAAACAAACTTGCCGCCTACGTATCATTCGGAGGATTATTGATGCGGCTGTTGGGCGATCCAAACAATTTACAC
GGATTCGAAGTGGACCAATGCGTTTACCTGCTGATGAAGAAATTAGCTTTTTAAAGTTATCTACAGTTAAGAAGGGGGGC
TATAATAATTTTACTGAAGATGAACTATATACATTTTTATACAATTAAAATATAAGCATTACAAATGTATATTATAATG




Most similar to sp|Q923G2|RPAB3_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q923G2|RPAB3_MOUSE DNA-directed RNA polymerases I, II, and III
           subunit RPABC3 OS=Mus musculus GN=Polr2h PE=2 SV=3
          Length = 150

 Score =  182 bits (463), Expect = 1e-45
 Identities = 93/130 (71%), Positives = 107/130 (82%)
 Frame = +1

Query: 142 KVSRLHCESESFKMELILDINSWIYPMDLGDKFRLVLATTLREDGQPDAGDWNPIEMDQN 321
           +VSRLHCESESFKM+LILD+N  IYP+DLGDKFRLV+A+TL EDG  D G++NP   D  
Sbjct: 24  RVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNP--TDDR 81

Query: 322 GSRADSFEYVMYGKIYRIEGDDKVKESHKNKLAAYVSFGGLLMRLLGDPNNLHGFEVDQC 501
            SRAD FEYVMYGK+YRIEGD+   E+   +L+AYVS+GGLLMRL GD NNLHGFEVD  
Sbjct: 82  PSRADQFEYVMYGKVYRIEGDETSTEA-ATRLSAYVSYGGLLMRLQGDANNLHGFEVDSR 140

Query: 502 VYLLMKKLAF 531
           VYLLMKKLAF
Sbjct: 141 VYLLMKKLAF 150